MARCH 30, 2005
VOLUME 2 NO. 6
 

Protein discovery promises to be key in AIDS prevention

Structure of 'spike' protein reveals how HIV plays hide
and seek with the immune system


HIV hides out in the body like a wolf in sheep's clothing, covering itself in host cellular debris. Spike-like protein complexes that lock onto the surface of host cells and ultimately lead to cellular infection are the only viral components that protrude beyond this invisibility cloak. A paper in the February 24 issue of Nature brings us one giant step closer to penetrating the disguise of this elusive enemy. The paper describes the physical structure of one of these spike proteins. This vital information could ultimately lead to a way of preventing infection from taking hold.

INDIA RUBBER PROTEIN
Protein crystallography was used to figure out what a spike protein called gp120 — derived from the simian form of AIDS (SIV) — looks like before it infects host cells. Researchers were amazed at the dramatic change in gp120's structure before and after cellular docking.

Apparently, gp120 is the Houdini of the protein world. It contorts to hide its critical docking machinery from antibodies until the moment it locks onto the host cell. Once hooked up with the CD4 receptor, it rearranges itself to deploy other sites necessary for cellular attachment and infection.

This discovery will help researchers devise new ways to keep HIV from infecting human cells. "The structure we have determined enables new thinking in two directions," explained study author Dr Steven Harrison, of the Howard Hughes Medical Institute in Boston. "One direction is, of course, design of new, small-molecule entry inhibitors. The deep hydrophobic cavity we have identified has all the hallmarks of a good drug target."

Researchers knew that the small molecule BM-378806 inhibited HIV-1 entry into host cells, but didn't understand how. Now it's apparent that BM-378806 wedges into a deep cavity on gp120's surface, preventing the protein from locking on to the surface of the host cell. This discovery should help guide the design of other small molecules to take advantage of gp120's vulnerabilities.

"The second direction concerns vaccine development," continued Dr Harrison. "The structure suggests experiments that may point to strategies for better immunogen design."

SUGAR BARRIER
Gaining a better understanding of how the protein is shaped in its unbound state allows researchers to design more effective antibodies to neutralize it before it attacks the host cell. This goal is made more challenging by gp120's trick of surrounding itself with sugar molecules that make it difficult for white blood cells to get a firm grip.

Despite these challenges, understanding gp120's contortionist ways takes us a step closer to designing a targeted drug or antibody that could strip the HIV virus of its disguise, leaving AIDS out in the cold.

Nature Feb 24, 2005;433:834-41

 

 

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